STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lmac_2274Conjugative transfer protein TraD. (617 aa)    
Predicted Functional Partners:
Lmac_2273
Putative conjugative transfer protein TraI.
 
   
 0.938
Lmac_2277
Putative conjugative transfer protein TraH.
 
     0.903
Lmac_2279
Putative conjugative transfer protein TraF.
 
     0.902
Lmac_2281
Putative conjugative transfer protein TrbC.
 
     0.902
Lmac_2283
Putative conjugative transfer protein TraW.
 
     0.900
Lmac_2278
Putative conjugative transfer protein TrbB.
 
     0.899
Lmac_2282
Putative conjugative transfer protein TraU.
 
     0.899
Lmac_2285
Putative conjugative transfer protein TraC.
 
  
 0.897
Lmac_2280
Conjugal transfer mating pair stabilization protein TraN.
 
     0.895
Lmac_2276
Putative sex pilus assembly and mating pair protein TraG.
 
     0.892
Your Current Organism:
Legionella maceachernii
NCBI taxonomy Id: 466
Other names: ATCC 35300, CCUG 31116, CIP 103846, DSM 16642, JCM 7566, L. maceachernii, NCTC 11982, Tatlockia maceachernii, strain Px-1-G-2-E2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.