STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lmac_2284Putative TrbI protein. (121 aa)    
Predicted Functional Partners:
Lmac_2282
Putative conjugative transfer protein TraU.
       0.798
Lmac_2283
Putative conjugative transfer protein TraW.
       0.798
Lmac_2285
Putative conjugative transfer protein TraC.
       0.798
Lmac_2276
Putative sex pilus assembly and mating pair protein TraG.
       0.788
Lmac_2277
Putative conjugative transfer protein TraH.
       0.788
Lmac_2278
Putative conjugative transfer protein TrbB.
       0.788
Lmac_2279
Putative conjugative transfer protein TraF.
       0.788
Lmac_2280
Conjugal transfer mating pair stabilization protein TraN.
       0.788
Lmac_2281
Putative conjugative transfer protein TrbC.
       0.788
Lmac_2275
Hypothetical protein.
       0.783
Your Current Organism:
Legionella maceachernii
NCBI taxonomy Id: 466
Other names: ATCC 35300, CCUG 31116, CIP 103846, DSM 16642, JCM 7566, L. maceachernii, NCTC 11982, Tatlockia maceachernii, strain Px-1-G-2-E2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.