STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lmac_2300Alpha/beta hydrolase family protein. (297 aa)    
Predicted Functional Partners:
Lmac_2302
Sensor histidine kinase.
 
 
   0.945
pksJ
Polyketide synthase, type I.
  
 0.898
Lmac_2148
Polyketide synthase module.
  
 0.887
Lmac_2756
Non-ribosomal peptide synthetase; Belongs to the ATP-dependent AMP-binding enzyme family.
 
 
 0.837
Lmac_2301
Hypothetical protein.
    
  0.835
pip_2
Proline iminopeptidase; Belongs to the peptidase S33 family.
  
  
  0.814
Lmac_2299
Hypothetical protein.
       0.798
Lmac_2303
Hypothetical protein.
       0.798
parB_3
Putative chromosome-partitioning protein ParB.
  
     0.736
Lmac_2287
Putative conjugative transfer protein TraB.
 
     0.706
Your Current Organism:
Legionella maceachernii
NCBI taxonomy Id: 466
Other names: ATCC 35300, CCUG 31116, CIP 103846, DSM 16642, JCM 7566, L. maceachernii, NCTC 11982, Tatlockia maceachernii, strain Px-1-G-2-E2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.