STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lmac_2326alanyl-tRNA synthetase. (224 aa)    
Predicted Functional Partners:
Lmac_2324
Hypothetical protein.
 
     0.818
Lmac_2325
YbaK / prolyl-tRNA synthetases associated domain protein.
       0.798
Lmac_2327
Phosphotransferase enzyme family protein.
       0.773
alaS
alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
  
  
 0.721
Lmac_2338
GNAT family acetyltransferase.
 
     0.578
Lmac_2336
GNAT family acetyltransferase.
 
     0.549
ydcN_2
DNA-binding transcriptional regulator.
       0.541
Lmac_2320
Aminoglycoside 6'-N-acetyltransferase.
  
     0.505
Lmac_0487
Ankyrin repeat family transporter protein.
  
     0.502
Lmac_2333
Methyltransferase.
 
     0.498
Your Current Organism:
Legionella maceachernii
NCBI taxonomy Id: 466
Other names: ATCC 35300, CCUG 31116, CIP 103846, DSM 16642, JCM 7566, L. maceachernii, NCTC 11982, Tatlockia maceachernii, strain Px-1-G-2-E2
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