Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Lmac_2388Putative DNA-binding transcriptional regulator. (77 aa)    
Predicted Functional Partners:
opuCC
Glycine betaine/carnitine/choline-binding protein OpuCC precursor.
    
  0.611
Lmac_1363
Hypothetical protein.
  
     0.606
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
     
 0.595
aph_1
Spectinomycin phosphotransferase.
  
  
  0.574
Lmac_2260
Hypothetical protein.
  
 
 0.513
Lmac_3125
Hypothetical protein.
  
 
 0.513
aph_2
Spectinomycin phosphotransferase.
  
  
  0.511
metB
Cystathionine beta-lyase.
  
 
 0.488
Lmac_0824
S-adenosyl-L-homocysteine hydrolase.
  
  
  0.423
hipA
HipA protein, DNA binding regulator.
 
     0.417
Your Current Organism:
Legionella maceachernii
NCBI taxonomy Id: 466
Other names: ATCC 35300, CCUG 31116, CIP 103846, DSM 16642, JCM 7566, L. maceachernii, NCTC 11982, Tatlockia maceachernii, strain Px-1-G-2-E2
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