STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lmac_2390Amidase. (218 aa)    
Predicted Functional Partners:
Lmac_2391
Hypothetical protein.
 
     0.827
dacA
D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5); Belongs to the peptidase S11 family.
     
 0.679
Lmac_2755
Peptidase family S51; Belongs to the peptidase S51 family.
  
     0.533
Lmac_2238
Hypothetical protein.
  
     0.504
Lmac_1908
Beta lactamase induction signal transducer AmpG.
  
   
 0.473
chiA1
Chitinase A1 precursor.
 
     0.466
Lmac_2392
Hypothetical protein.
       0.450
Lmac_2302
Sensor histidine kinase.
  
     0.444
parB_3
Putative chromosome-partitioning protein ParB.
  
     0.433
Lmac_0540
SH3 domain of the SH3b1 type.
 
  
 0.421
Your Current Organism:
Legionella maceachernii
NCBI taxonomy Id: 466
Other names: ATCC 35300, CCUG 31116, CIP 103846, DSM 16642, JCM 7566, L. maceachernii, NCTC 11982, Tatlockia maceachernii, strain Px-1-G-2-E2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.