STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yjbJStress response protein; Belongs to the UPF0337 (CsbD) family. (68 aa)    
Predicted Functional Partners:
Lmac_2701
Transmembrane protein.
 
    0.881
Lmac_1309
Osmotically inducible protein Y.
  
  
 0.868
Lmac_1320
Transmembrane protein.
 
    0.849
Lmac_0914
Protein with a Dodecin-like topology.
   
    0.595
Lmac_0053
Phospholipid binding protein.
 
    0.588
Lmac_2396
Endo-1,4 beta-glucanase.
       0.565
Lmac_2397
Endo-1,4-beta-glucanase.
       0.565
Lmac_0650
OsmC-like protein.
   
  
 0.526
Lmac_2963
Conserved hypothetical protein; putative periplasmic or secreted lipoprotein.
  
    0.526
Lmac_2964
Hemolysin, lipoprotein.
  
    0.526
Your Current Organism:
Legionella maceachernii
NCBI taxonomy Id: 466
Other names: ATCC 35300, CCUG 31116, CIP 103846, DSM 16642, JCM 7566, L. maceachernii, NCTC 11982, Tatlockia maceachernii, strain Px-1-G-2-E2
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