STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lmac_2420RND efflux membrane fusion protein. (328 aa)    
Predicted Functional Partners:
Lmac_2421
Toxin secretion ABC transporter HlyB/MsbA family transporter ATP-binding protein.
  0.983
Lmac_2419
Multidrug efflux protein, outer membrane component.
 
  0.975
Lmac_2424
Hypothetical protein; Belongs to the UPF0753 family.
 
     0.717
Lmac_2422
LysR family transporter transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
       0.638
cecC
Chemiosmotic efflux system C protein C.
  
  0.605
Lmac_3066
Hypothetical protein.
  
     0.604
Lmac_1682
ABC transporter.
  
  0.589
Lmac_1683
Hypothetical protein; ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain.
  
  0.589
Lmac_2425
Hypothetical protein.
 
     0.566
Lmac_2718
Outer membrane efflux protein.
  
  0.539
Your Current Organism:
Legionella maceachernii
NCBI taxonomy Id: 466
Other names: ATCC 35300, CCUG 31116, CIP 103846, DSM 16642, JCM 7566, L. maceachernii, NCTC 11982, Tatlockia maceachernii, strain Px-1-G-2-E2
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