STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lmac_2421Toxin secretion ABC transporter HlyB/MsbA family transporter ATP-binding protein. (526 aa)    
Predicted Functional Partners:
Lmac_2420
RND efflux membrane fusion protein.
  0.983
Lmac_2419
Multidrug efflux protein, outer membrane component.
 
 
  0.961
Lmac_1684
Multidrug resistance efflux pump PmrA.
 
 0.857
Lmac_2424
Hypothetical protein; Belongs to the UPF0753 family.
 
     0.709
Lmac_2422
LysR family transporter transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
 
     0.688
Lmac_0408
Outer membrane protein TolC.
  
 
 0.646
Lmac_2425
Hypothetical protein.
 
     0.641
Lmac_1369
Hemolysin D.
   
 0.580
emrA_1
Multidrug efflux system.
   
  0.579
emrA_2
Multidrug efflux system.
   
  0.579
Your Current Organism:
Legionella maceachernii
NCBI taxonomy Id: 466
Other names: ATCC 35300, CCUG 31116, CIP 103846, DSM 16642, JCM 7566, L. maceachernii, NCTC 11982, Tatlockia maceachernii, strain Px-1-G-2-E2
Server load: medium (50%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.