STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Lmac_2422LysR family transporter transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (282 aa)    
Predicted Functional Partners:
Lmac_2419
Multidrug efflux protein, outer membrane component.
 
     0.804
Lmac_2421
Toxin secretion ABC transporter HlyB/MsbA family transporter ATP-binding protein.
 
     0.802
Lmac_2420
RND efflux membrane fusion protein.
       0.771
Lmac_1799
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.678
Lmac_2423
NADH dehydrogenase subunit 5.
 
     0.663
Lmac_2424
Hypothetical protein; Belongs to the UPF0753 family.
 
     0.660
Lmac_2425
Hypothetical protein.
 
     0.635
pksJ
Polyketide synthase, type I.
    
 0.615
Lmac_2035
Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.570
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
   0.505
Your Current Organism:
Legionella maceachernii
NCBI taxonomy Id: 466
Other names: ATCC 35300, CCUG 31116, CIP 103846, DSM 16642, JCM 7566, L. maceachernii, NCTC 11982, Tatlockia maceachernii, strain Px-1-G-2-E2
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