STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lmac_2442Glycosyl transferase family 2. (239 aa)    
Predicted Functional Partners:
Lmac_2443
Glucosamine-6-phosphate deaminase-like protein.
 
     0.931
Lmac_0117
GGDEF domain-containing sensory box protein.
  
 
 0.860
Lmac_0884
Regulatory protein (GGDEF and EAL domains).
  
 
 0.853
Lmac_1881
Protein with TPR motifs (protein-protein interaction motif).
  
 
 0.837
ugd
UDP-glucose 6-dehydrogenase.
  
 
 0.812
crnA
Creatinine amidohydrolase.
  
  
 0.782
Lmac_1407
Methyltransferase.
  
 
 0.751
Lmac_0179
TPR repeat containing protein.
  
 
 0.742
Lmac_0180
Hypothetical protein.
  
 
 0.742
avrBs3_1
Avirulence protein AvrBs3.
  
 
 0.742
Your Current Organism:
Legionella maceachernii
NCBI taxonomy Id: 466
Other names: ATCC 35300, CCUG 31116, CIP 103846, DSM 16642, JCM 7566, L. maceachernii, NCTC 11982, Tatlockia maceachernii, strain Px-1-G-2-E2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.