STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
pilEtype-IV pilin. (144 aa)    
Predicted Functional Partners:
Lmac_2454
Coiled-coil protein.
       0.872
pilN
Tfp pilus assembly protein PilN.
 
  
 0.836
pilM
Tfp pilus assembly protein, ATPase PilM.
 
   
 0.782
lidA
Dot/Icm system substrate protein LidA.
       0.775
Lmac_0335
Fimbrial protein, type IV pilin, PilE; Belongs to the N-Me-Phe pilin family.
 
  
 0.767
Lmac_1204
Hypothetical protein.
  
  
 0.755
pilO
Tfp pilus assembly protein PilO.
 
  
 0.746
recO
DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination.
       0.738
pilQ
Type IV pilus (Tfp) assembly protein PilQ.
 
   
 0.707
era
GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.
       0.601
Your Current Organism:
Legionella maceachernii
NCBI taxonomy Id: 466
Other names: ATCC 35300, CCUG 31116, CIP 103846, DSM 16642, JCM 7566, L. maceachernii, NCTC 11982, Tatlockia maceachernii, strain Px-1-G-2-E2
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