STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lmac_2485Ankyrin repeat protein. (407 aa)    
Predicted Functional Partners:
Lmac_1881
Protein with TPR motifs (protein-protein interaction motif).
   
  0.768
Lmac_2344
Phosphotransferase enzyme family protein.
  
     0.665
Lmac_2276
Putative sex pilus assembly and mating pair protein TraG.
  
     0.653
Lmac_2358
Phosphotransferase enzyme family protein.
  
     0.644
Lmac_2278
Putative conjugative transfer protein TrbB.
  
 
  0.640
Lmac_2311
NHL repeat protein.
  
     0.638
Lmac_1477
Ankyrin repeat protein.
  
     0.627
Lmac_2273
Putative conjugative transfer protein TraI.
  
 
   0.627
Lmac_2280
Conjugal transfer mating pair stabilization protein TraN.
  
     0.619
Lmac_2287
Putative conjugative transfer protein TraB.
  
     0.619
Your Current Organism:
Legionella maceachernii
NCBI taxonomy Id: 466
Other names: ATCC 35300, CCUG 31116, CIP 103846, DSM 16642, JCM 7566, L. maceachernii, NCTC 11982, Tatlockia maceachernii, strain Px-1-G-2-E2
Server load: medium (58%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.