Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
Lmac_2487U-box domain protein. (266 aa)    
Predicted Functional Partners:
flgC
Flagellar basal body rod protein FlgC; Belongs to the flagella basal body rod proteins family.
    
   0.694
Lmac_2409
7-dehydrocholesterol reductase.
  
     0.690
Lmac_0571
Thaumatin domain-containing protein.
  
    0.668
Lmac_1586
Acid phosphatase, class B.
  
     0.624
Lmac_0768
Bifunctional PutA protein; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
    
  0.572
degP
DegP protease (Do-like, S2-serine-like).
  
 
  0.492
Lmac_0160
Pyoverdine biosynthesis regulatory SyrP-like protein.
  
    0.452
Lmac_1475
Hypothetical protein.
  
 
   0.432
Lmac_0823
Sensory box sensor histidine kinase/response regulator.
    
 0.418
Lmac_1280
Sensory histidine-kinase / response regulator.
    
 0.418
Your Current Organism:
Legionella maceachernii
NCBI taxonomy Id: 466
Other names: ATCC 35300, CCUG 31116, CIP 103846, DSM 16642, JCM 7566, L. maceachernii, NCTC 11982, Tatlockia maceachernii, strain Px-1-G-2-E2
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