STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mltDMembrane bound lytic murein transglycosylase D. (476 aa)    
Predicted Functional Partners:
amiB
N-acetylmuramoyl-L-alanine amidase.
 
 
 0.878
Lmac_2668
Protein IcmE (DotG).
   
 
 0.874
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
    
 0.851
flgG
Flagellar basal body rod protein FlgG.
  
   0.771
flgF
Flagellar basal body rod protein FlgF.
  
   0.771
rhsA
Putative deoxyribonuclease RhsA.
    
 0.719
cphA
Cyanophycin synthetase.
     
 0.683
Lmac_0986
M23/M37 family transporter peptidase.
 
  
 0.646
Lmac_2436
PAS fold protein.
  
  
 0.602
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
     
 0.595
Your Current Organism:
Legionella maceachernii
NCBI taxonomy Id: 466
Other names: ATCC 35300, CCUG 31116, CIP 103846, DSM 16642, JCM 7566, L. maceachernii, NCTC 11982, Tatlockia maceachernii, strain Px-1-G-2-E2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.