STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lmac_2544AIG2-like family protein. (118 aa)    
Predicted Functional Partners:
Lmac_2545
Transcriptional regulator.
       0.560
murB
UDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation.
    
  0.508
murD
UDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family.
     
  0.500
gcvT
Glycine cleavage system T protein; The glycine cleavage system catalyzes the degradation of glycine.
  
 0.445
Lmac_0074
Succinylglutamate desuccinylase / aspartoacylase family protein.
    
 0.443
Lmac_1043
2-oxoisovalerate dehydrogenase, E1 component, alpha and beta fusion.
 
  
 0.424
Lmac_2546
Bleomycin resistance protein.
       0.409
etfB
Electron transfer flavoprotein beta-subunit (Beta-ETF).
    
  0.407
etfA
Electron transfer flavoprotein subunit alpha.
    
  0.407
Your Current Organism:
Legionella maceachernii
NCBI taxonomy Id: 466
Other names: ATCC 35300, CCUG 31116, CIP 103846, DSM 16642, JCM 7566, L. maceachernii, NCTC 11982, Tatlockia maceachernii, strain Px-1-G-2-E2
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