STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
copA_1Copper transporting P-type ATPase. (1026 aa)    
Predicted Functional Partners:
dotA
Defect in organelle trafficking protein DotA.
  
     0.646
Lmac_1095
Putative membrane protein YdgA-like protein.
  
     0.637
Lmac_3043
Putative helicase/relaxase.
  
     0.625
Lmac_3045
Cysteine protease.
  
 
   0.618
Lmac_1632
General secretion pathway protein L; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
  
     0.587
Lmac_2814
Protein LvrA.
  
     0.577
Lmac_0899
Ectonucleoside triphosphate diphosphohydrolase.
  
     0.572
Lmac_2552
Dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.
       0.564
Lmac_2668
Protein IcmE (DotG).
  
     0.557
Lmac_1914
Protein-tyrosine phosphatase.
  
     0.555
Your Current Organism:
Legionella maceachernii
NCBI taxonomy Id: 466
Other names: ATCC 35300, CCUG 31116, CIP 103846, DSM 16642, JCM 7566, L. maceachernii, NCTC 11982, Tatlockia maceachernii, strain Px-1-G-2-E2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.