STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lmac_2668Protein IcmE (DotG). (1085 aa)    
Predicted Functional Partners:
Lmac_2667
IcmK protein.
 
 
 
 0.999
dotC
Defect in organelle trafficking lipoprotein DotC.
  
 
 
 0.996
Lmac_2669
Protein IcmG (DotF).
   
 
 0.996
dotD
Lipoprotein DotD.
    
 
 0.984
lphA
LphA (DotK).
 
 
   0.982
Lmac_0174
Hypothetical protein.
    
   0.977
Lmac_0245
Neurogenic locus notch like protein precursor.
    
   0.977
mltD
Membrane bound lytic murein transglycosylase D.
   
 
 0.964
amiB
N-acetylmuramoyl-L-alanine amidase.
   
 
 0.959
Lmac_2666
Protein IcmL (DotI).
 
   
 0.950
Your Current Organism:
Legionella maceachernii
NCBI taxonomy Id: 466
Other names: ATCC 35300, CCUG 31116, CIP 103846, DSM 16642, JCM 7566, L. maceachernii, NCTC 11982, Tatlockia maceachernii, strain Px-1-G-2-E2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.