STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Lmac_2669Protein IcmG (DotF). (273 aa)    
Predicted Functional Partners:
Lmac_2668
Protein IcmE (DotG).
   
 
 0.975
Lmac_2667
IcmK protein.
   
 
 0.972
lphA
LphA (DotK).
   
   0.956
icmM/dotJ
Component of the Dot/Icm secretion system, predicted inner membrane protein.
     
 0.908
Lmac_2670
IcmC (DotE).
     
 0.887
Lmac_2666
Protein IcmL (DotI).
     
 0.862
icmD
Protein IcmD (DotP).
   
 
 0.853
dotC
Defect in organelle trafficking lipoprotein DotC.
    
 
 0.842
icmX
Intracellular multiplication protein IcmX.
    
 
 0.833
dotD
Lipoprotein DotD.
    
 
 0.833
Your Current Organism:
Legionella maceachernii
NCBI taxonomy Id: 466
Other names: ATCC 35300, CCUG 31116, CIP 103846, DSM 16642, JCM 7566, L. maceachernii, NCTC 11982, Tatlockia maceachernii, strain Px-1-G-2-E2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.