STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lmac_2720Hypothetical protein. (265 aa)    
Predicted Functional Partners:
Lmac_2719
Protein with a bacterial immunoglobulin-like domain protein.
       0.664
ubiH_1
2-polyprenyl-6-methoxyphenol hydroxylase.
       0.575
ubiH_2
2-octaprenyl-6-methoxyphenol hydroxylase.
       0.575
Lmac_2723
Xaa-Pro aminopeptidase.
       0.575
Lmac_2724
Hypothetical protein; Belongs to the UPF0149 family.
       0.531
Lmac_2716
ABC transporter ATP-binding protein.
       0.499
Lmac_2717
Membrane-fusion protein AcrA.
       0.499
Lmac_2718
Outer membrane efflux protein.
       0.499
Lmac_2880
Outer membrane protein OmpH; Belongs to the skp family.
    
 
 0.431
Your Current Organism:
Legionella maceachernii
NCBI taxonomy Id: 466
Other names: ATCC 35300, CCUG 31116, CIP 103846, DSM 16642, JCM 7566, L. maceachernii, NCTC 11982, Tatlockia maceachernii, strain Px-1-G-2-E2
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