Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
wrbAFlavoprotein WrbA (Trp repressor binding protein). (199 aa)    
Predicted Functional Partners:
Lmac_1002
Trp repressor binding protein; Belongs to the WrbA family.
  
  
 
0.879
ubiE
Ubiquinone/menaquinone biosynthesis methyltransferase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3- methyl-6-methoxy-1,4-benzoquinol (DMQH2).
     
  0.858
Lmac_2937
Pirin-like protein; Belongs to the pirin family.
       0.776
Lmac_1638
DNA binding stress protein; Belongs to the Dps family.
   
  
 0.676
azoB
NAD(P)H azoreductase.
     
  0.549
Lmac_0134
Serine protein kinase.
   
    0.545
Lmac_1309
Osmotically inducible protein Y.
   
    0.544
rhsA
Putative deoxyribonuclease RhsA.
   
    0.539
resA
Thiol-disulfide oxidoreductase ResA.
       0.532
fadH
2,4-dienoyl-CoA reductase FadH1.
    
 0.442
Your Current Organism:
Legionella maceachernii
NCBI taxonomy Id: 466
Other names: ATCC 35300, CCUG 31116, CIP 103846, DSM 16642, JCM 7566, L. maceachernii, NCTC 11982, Tatlockia maceachernii, strain Px-1-G-2-E2
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