Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Lmac_2943ABC transporter of LPS O-antigen. (247 aa)    
Predicted Functional Partners:
Lmac_2944
Polysaccharide ABC transporter, permease protein.
 
 0.999
comF
Competence protein ComF.
   
    0.695
Lmac_3037
Hypothetical protein.
 
 0.629
Lmac_2148
Polyketide synthase module.
     
 0.577
Lmac_1341
ABC transporter ATP binding protein.
     
  0.549
Lmac_1370
ABC transporter ATP-binding protein.
     
  0.549
pksJ
Polyketide synthase, type I.
       0.539
Lmac_3004
Glycosyltransferase.
 
  
 0.533
Lmac_0664
Glycosyltransferase, lipopolysaccharide biosynthesis protein.
 
 
 0.518
rmlB
dTDP-D-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
 
   
 0.516
Your Current Organism:
Legionella maceachernii
NCBI taxonomy Id: 466
Other names: ATCC 35300, CCUG 31116, CIP 103846, DSM 16642, JCM 7566, L. maceachernii, NCTC 11982, Tatlockia maceachernii, strain Px-1-G-2-E2
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