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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yraODnaA initiator-associating factor for replication initiation. (198 aa)    
Predicted Functional Partners:
Lmac_3011
D,D-heptose 1,7-bisphosphate phosphatase.
 
 0.965
Lmac_0083
D,D-heptose 1,7-bisphosphate phosphatase.
 
 
 0.920
hddA
D-glycero-alpha-D-manno-heptose 7-phosphate kinase.
 
 0.867
Lmac_2963
Conserved hypothetical protein; putative periplasmic or secreted lipoprotein.
  
    0.824
Lmac_2964
Hemolysin, lipoprotein.
  
    0.821
hisB
Imidazole glycerol-phosphate dehydratase/histidinol phosphatase; In the N-terminal section; belongs to the histidinol- phosphatase family.
 
 
 0.776
Lmac_2961
Hypothetical protein; Belongs to the UPF0102 family.
  
  
 0.750
Lmac_2960
Lipoprotein.
  
    0.695
Lmac_1907
Heptosyl transferase, glycosyltransferase family 9 protein.
 
  
 0.658
dnaA
Chromosome replication initiator DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.
    
 
 0.625
Your Current Organism:
Legionella maceachernii
NCBI taxonomy Id: 466
Other names: ATCC 35300, CCUG 31116, CIP 103846, DSM 16642, JCM 7566, L. maceachernii, NCTC 11982, Tatlockia maceachernii, strain Px-1-G-2-E2
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