Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
Lmac_2983GNAT family acetyltransferase. (330 aa)    
Predicted Functional Partners:
grpB_2
Glutamate rich protein GrpB.
 
    0.935
Lmac_2253
Multifunctional nucleotidyltransferase/glutamate rich protein GrpB/ribosomal protein alanine acetyltransferase.
 
     0.836
Lmac_2249
ATPase.
 
     0.801
Lmac_2320
Aminoglycoside 6'-N-acetyltransferase.
  
 
  0.760
Lmac_2339
Putative aminoglycoside phosphotransferase.
  
     0.754
Lmac_2338
GNAT family acetyltransferase.
  
     0.751
grpB_1
Glutamate rich protein GrpB.
 
    0.744
Lmac_2278
Putative conjugative transfer protein TrbB.
  
     0.738
aph_1
Spectinomycin phosphotransferase.
  
     0.731
Lmac_2342
D12 class N6 adenine-specific DNA methyltransferase.
  
     0.717
Your Current Organism:
Legionella maceachernii
NCBI taxonomy Id: 466
Other names: ATCC 35300, CCUG 31116, CIP 103846, DSM 16642, JCM 7566, L. maceachernii, NCTC 11982, Tatlockia maceachernii, strain Px-1-G-2-E2
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