STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lmac_3013Glycosyltransferase, group 2 family protein (glycan biosynthesis). (326 aa)    
Predicted Functional Partners:
Lmac_3012
Putative integral inner membrane protein.
     
 0.796
Lmac_2148
Polyketide synthase module.
  
 0.727
Lmac_3011
D,D-heptose 1,7-bisphosphate phosphatase.
   
   0.720
Lmac_0216
Melitin resistance protein.
 
 
 0.679
Lmac_2756
Non-ribosomal peptide synthetase; Belongs to the ATP-dependent AMP-binding enzyme family.
  
 
 0.601
yvfE_1
Cell wall biosynthesis regulatory pyridoxal phosphate-dependent protein; Belongs to the DegT/DnrJ/EryC1 family.
  
  
 0.578
pksJ
Polyketide synthase, type I.
  
 0.540
Lmac_1756
Dolichyl-phosphate-mannose-protein mannosyltransferase.
 
 
 0.509
hddA
D-glycero-alpha-D-manno-heptose 7-phosphate kinase.
       0.493
Lmac_3015
Hypothetical protein.
       0.493
Your Current Organism:
Legionella maceachernii
NCBI taxonomy Id: 466
Other names: ATCC 35300, CCUG 31116, CIP 103846, DSM 16642, JCM 7566, L. maceachernii, NCTC 11982, Tatlockia maceachernii, strain Px-1-G-2-E2
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