Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Lmac_3032Glycosyl transferase, group 2 family protein. (311 aa)    
Predicted Functional Partners:
Lmac_3030
O antigen biosynthesis protein.
  
 
 0.832
Lmac_3031
NAD-dependent epimerase/dehydratase.
 
 
  0.831
Lmac_2148
Polyketide synthase module.
  
 0.727
yvfE_2
Cell wall biosynthesis regulatory pyridoxal phosphate-dependent protein; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.660
Lmac_0216
Melitin resistance protein.
 
 
 0.607
Lmac_2756
Non-ribosomal peptide synthetase; Belongs to the ATP-dependent AMP-binding enzyme family.
  
 
 0.601
pksJ
Polyketide synthase, type I.
  
 0.540
Lmac_1756
Dolichyl-phosphate-mannose-protein mannosyltransferase.
 
 
 0.508
Lmac_1279
Peptide synthetase, non-ribosomal.
  
 
 0.476
rfbF_2
Glucose-1-phosphate cytidylyltransferase (CDP-glucose pyrophosphorylase).
  
 
  0.440
Your Current Organism:
Legionella maceachernii
NCBI taxonomy Id: 466
Other names: ATCC 35300, CCUG 31116, CIP 103846, DSM 16642, JCM 7566, L. maceachernii, NCTC 11982, Tatlockia maceachernii, strain Px-1-G-2-E2
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