STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lmac_3048SET domain protein. (379 aa)    
Predicted Functional Partners:
Lmac_1639
Ankyrin repeat protein.
  
 
  0.841
Lmac_2865
Ankyrin repeat protein.
  
 
  0.841
Lmac_1478
Ankyrin repeat-containing protein.
  
 
  0.835
Lmac_2227
Ankyrin repeats (3 copies).
  
 
  0.828
atpD
ATP synthase F0F1 subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.
    
 0.822
Lmac_0037
Rho GTPase (Miro-like).
  
 
  0.808
hdaH
Histone deacetylase-like amidohydrolase.
   
 0.803
Lmac_2173
Phosphoprotein phosphatase.
  
 
   0.799
Lmac_2556
Putative esterase with patatin domain protein.
  
 
   0.785
Lmac_0400
Regulator of chromosome condensation (RCC1) repeat protein.
  
  
  0.781
Your Current Organism:
Legionella maceachernii
NCBI taxonomy Id: 466
Other names: ATCC 35300, CCUG 31116, CIP 103846, DSM 16642, JCM 7566, L. maceachernii, NCTC 11982, Tatlockia maceachernii, strain Px-1-G-2-E2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.