STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lmac_3085Putative methyltransferase. (235 aa)    
Predicted Functional Partners:
Lmac_2017
Zip family transporter.
 
     0.684
dotA
Defect in organelle trafficking protein DotA.
  
     0.642
Lmac_2814
Protein LvrA.
  
     0.639
Lmac_1095
Putative membrane protein YdgA-like protein.
  
     0.634
Lmac_0148
Tubulin-tyrosine ligase family protein.
  
     0.629
Lmac_2668
Protein IcmE (DotG).
  
     0.618
Lmac_1481
6-pyruvoyl tetrahydropterin synthase.
  
    0.600
Lmac_3086
Hypothetical protein.
       0.571
enhA_5
Enhanced entry protein EnhA.
  
     0.546
Lmac_3045
Cysteine protease.
  
     0.540
Your Current Organism:
Legionella maceachernii
NCBI taxonomy Id: 466
Other names: ATCC 35300, CCUG 31116, CIP 103846, DSM 16642, JCM 7566, L. maceachernii, NCTC 11982, Tatlockia maceachernii, strain Px-1-G-2-E2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.