STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lmac_3098Amino acid transporter; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family. (412 aa)    
Predicted Functional Partners:
brnQ
Branched-chain amino acid transport system 2 carrier protein; Component of the transport system for branched-chain amino acids.
  
   
 0.654
Lmac_1008
Putative Methyltransferase.
  
     0.575
Lmac_0315
Hypothetical protein.
  
     0.520
Lmac_1995
Hemerythrin HHE cation binding domain protein.
  
     0.504
sdhD
Succinate dehydrogenase, hydrophobic membrane anchor protein; Membrane-anchoring subunit of succinate dehydrogenase (SDH).
   
    0.495
rssA_1
Esterase of the alpha-beta hydrolase superfamily protein.
  
     0.482
Lmac_0037
Rho GTPase (Miro-like).
  
 
  0.478
Lmac_3099
6,7-dimethyl-8-ribityllumazine synthase; Belongs to the DMRL synthase family.
       0.442
Lmac_3100
6,7-dimethyl-8-ribityllumazine synthase; Belongs to the DMRL synthase family.
       0.442
Lmac_2520
Major facilitator family transporter.
  
     0.437
Your Current Organism:
Legionella maceachernii
NCBI taxonomy Id: 466
Other names: ATCC 35300, CCUG 31116, CIP 103846, DSM 16642, JCM 7566, L. maceachernii, NCTC 11982, Tatlockia maceachernii, strain Px-1-G-2-E2
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