STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lmac_3122Transposase, IS4 family TnpA. (158 aa)    
Predicted Functional Partners:
Lmac_2260
Hypothetical protein.
  
     0.628
Lmac_1192
Reverse transcriptase.
  
     0.591
Lmac_3121
Transposase, IS4 family TnpA.
       0.558
Lmac_2141
Putative Transposase (IS4 family).
  
     0.483
Lmac_1855
Plasmid stabilization system protein.
  
     0.466
Lmac_1467
Transmembrane protein.
  
     0.461
Lmac_2258
Type III restriction enzyme, res subunit.
  
     0.440
Lmac_2259
Antitoxin HipB.
  
     0.415
Your Current Organism:
Legionella maceachernii
NCBI taxonomy Id: 466
Other names: ATCC 35300, CCUG 31116, CIP 103846, DSM 16642, JCM 7566, L. maceachernii, NCTC 11982, Tatlockia maceachernii, strain Px-1-G-2-E2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.