STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
abcT3ABC transporter ATP binding protein. (437 aa)    
Predicted Functional Partners:
Lmac_2912
Thiamine biosynthesis protein NMT-1.
  
 0.983
Lmac_3136
ABC transporter permease.
 
   
 0.980
pksJ
Polyketide synthase, type I.
  
 
 0.834
glnK
Carbamoylphosphate synthase large subunit; Belongs to the P(II) protein family.
    
 
 0.733
Lmac_3137
Hypothetical protein.
       0.492
Lmac_0160
Pyoverdine biosynthesis regulatory SyrP-like protein.
  
 
  0.469
cs2
Clavaminate synthase 2.
  
 
  0.469
ugpB
Glycerol-3-phosphate-binding periplasmic protein precursor.
    
  0.437
ugpA
Sn-glycerol-3-phosphate transmembrane ABC transporter.
    
  0.429
ugpE
Sn-glycerol-3-phosphate transmembrane ABC transporter; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane.
    
  0.429
Your Current Organism:
Legionella maceachernii
NCBI taxonomy Id: 466
Other names: ATCC 35300, CCUG 31116, CIP 103846, DSM 16642, JCM 7566, L. maceachernii, NCTC 11982, Tatlockia maceachernii, strain Px-1-G-2-E2
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