Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AMB84669.1 | AMB84670.1 | AWM79_04850 | AWM79_04855 | HAAAP family serine/threonine permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Ribonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the RNase T2 family. | 0.452 |
AMB84669.1 | AMB84671.1 | AWM79_04850 | AWM79_04860 | HAAAP family serine/threonine permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Amino acid dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.538 |
AMB84670.1 | AMB84669.1 | AWM79_04855 | AWM79_04850 | Ribonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the RNase T2 family. | HAAAP family serine/threonine permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.452 |
AMB84670.1 | AMB84671.1 | AWM79_04855 | AWM79_04860 | Ribonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the RNase T2 family. | Amino acid dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.581 |
AMB84670.1 | AMB84831.1 | AWM79_04855 | AWM79_05720 | Ribonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the RNase T2 family. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.463 |
AMB84670.1 | AMB85495.1 | AWM79_04855 | AWM79_09370 | Ribonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the RNase T2 family. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0337 (CsbD) family. | 0.457 |
AMB84670.1 | AMB88216.1 | AWM79_04855 | AWM79_04555 | Ribonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the RNase T2 family. | Peptidoglycan-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.428 |
AMB84670.1 | rimO | AWM79_04855 | AWM79_09615 | Ribonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the RNase T2 family. | Ribosomal protein S12 methylthiotransferase RimO; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily. | 0.499 |
AMB84671.1 | AMB84669.1 | AWM79_04860 | AWM79_04850 | Amino acid dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | HAAAP family serine/threonine permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.538 |
AMB84671.1 | AMB84670.1 | AWM79_04860 | AWM79_04855 | Amino acid dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Ribonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the RNase T2 family. | 0.581 |
AMB84831.1 | AMB84670.1 | AWM79_05720 | AWM79_04855 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Ribonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the RNase T2 family. | 0.463 |
AMB85495.1 | AMB84670.1 | AWM79_09370 | AWM79_04855 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0337 (CsbD) family. | Ribonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the RNase T2 family. | 0.457 |
AMB88216.1 | AMB84670.1 | AWM79_04555 | AWM79_04855 | Peptidoglycan-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Ribonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the RNase T2 family. | 0.428 |
rimO | AMB84670.1 | AWM79_09615 | AWM79_04855 | Ribosomal protein S12 methylthiotransferase RimO; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily. | Ribonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the RNase T2 family. | 0.499 |