STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDU83668.1Transcriptional regulator, DeoR family. (251 aa)    
Predicted Functional Partners:
SDU81896.1
1-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family.
 
  
 0.910
SDU81904.1
PTS system D-fructose-specific IIB component (F1P-forming), Frc family /PTS system D-fructose-specific IIC component (F1P-forming), Frc family.
 
  
 0.878
SDU83660.1
Homodimeric glycerol 3-phosphate dehydrogenase (quinone); Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
 
  
 0.804
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
 
  
 0.770
SDU97985.1
Ribose-5-phosphate isomerase.
  
 
 0.667
SDU83678.1
Glycerol uptake facilitator protein; Manually curated; Belongs to the MIP/aquaporin (TC 1.A.8) family.
 
  
 0.638
SDV03562.1
Phosphocarrier protein HPr.
 
  
 0.626
SDV03615.1
Phosphocarrier protein HPr.
 
  
 0.625
SDU81889.1
Phosphocarrier protein HPr; Belongs to the PEP-utilizing enzyme family.
 
  
 0.570
SDU91052.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
   
 0.565
Your Current Organism:
Pseudomonas mucidolens
NCBI taxonomy Id: 46679
Other names: ATCC 4685, CIP 103298, IAM 12406, JCM 2781, LMG 2223, LMG:2223, NBRC 103159, NCTC 8068, NRRL B-16, P. mucidolens
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.