Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDU84746.1 | SDU84760.1 | SAMN05216202_0503 | SAMN05216202_0505 | Hypothetical protein. | Hypothetical protein. | 0.627 |
SDU84746.1 | SDU84765.1 | SAMN05216202_0503 | SAMN05216202_0506 | Hypothetical protein. | Translation factor SUA5; Belongs to the SUA5 family. | 0.620 |
SDU84746.1 | SDU84772.1 | SAMN05216202_0503 | SAMN05216202_0507 | Hypothetical protein. | Condensin subunit ScpA; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves. | 0.620 |
SDU84746.1 | SDU84779.1 | SAMN05216202_0503 | SAMN05216202_0508 | Hypothetical protein. | Segregation and condensation protein B; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves. | 0.652 |
SDU84760.1 | SDU84746.1 | SAMN05216202_0505 | SAMN05216202_0503 | Hypothetical protein. | Hypothetical protein. | 0.627 |
SDU84760.1 | SDU84765.1 | SAMN05216202_0505 | SAMN05216202_0506 | Hypothetical protein. | Translation factor SUA5; Belongs to the SUA5 family. | 0.887 |
SDU84760.1 | SDU84772.1 | SAMN05216202_0505 | SAMN05216202_0507 | Hypothetical protein. | Condensin subunit ScpA; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves. | 0.809 |
SDU84760.1 | SDU84779.1 | SAMN05216202_0505 | SAMN05216202_0508 | Hypothetical protein. | Segregation and condensation protein B; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves. | 0.786 |
SDU84765.1 | SDU84746.1 | SAMN05216202_0506 | SAMN05216202_0503 | Translation factor SUA5; Belongs to the SUA5 family. | Hypothetical protein. | 0.620 |
SDU84765.1 | SDU84760.1 | SAMN05216202_0506 | SAMN05216202_0505 | Translation factor SUA5; Belongs to the SUA5 family. | Hypothetical protein. | 0.887 |
SDU84765.1 | SDU84772.1 | SAMN05216202_0506 | SAMN05216202_0507 | Translation factor SUA5; Belongs to the SUA5 family. | Condensin subunit ScpA; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves. | 0.809 |
SDU84765.1 | SDU84779.1 | SAMN05216202_0506 | SAMN05216202_0508 | Translation factor SUA5; Belongs to the SUA5 family. | Segregation and condensation protein B; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves. | 0.789 |
SDU84772.1 | SDU84746.1 | SAMN05216202_0507 | SAMN05216202_0503 | Condensin subunit ScpA; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves. | Hypothetical protein. | 0.620 |
SDU84772.1 | SDU84760.1 | SAMN05216202_0507 | SAMN05216202_0505 | Condensin subunit ScpA; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves. | Hypothetical protein. | 0.809 |
SDU84772.1 | SDU84765.1 | SAMN05216202_0507 | SAMN05216202_0506 | Condensin subunit ScpA; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves. | Translation factor SUA5; Belongs to the SUA5 family. | 0.809 |
SDU84772.1 | SDU84779.1 | SAMN05216202_0507 | SAMN05216202_0508 | Condensin subunit ScpA; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves. | Segregation and condensation protein B; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves. | 0.999 |
SDU84772.1 | SDU84797.1 | SAMN05216202_0507 | SAMN05216202_0511 | Condensin subunit ScpA; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves. | Ribosomal large subunit pseudouridine synthase B; Belongs to the pseudouridine synthase RsuA family. | 0.443 |
SDU84772.1 | cmk | SAMN05216202_0507 | SAMN05216202_2822 | Condensin subunit ScpA; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves. | Cytidylate kinase. | 0.784 |
SDU84772.1 | smc | SAMN05216202_0507 | SAMN05216202_2973 | Condensin subunit ScpA; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves. | Condensin subunit Smc; Required for chromosome condensation and partitioning. Belongs to the SMC family. | 0.980 |
SDU84779.1 | SDU84746.1 | SAMN05216202_0508 | SAMN05216202_0503 | Segregation and condensation protein B; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves. | Hypothetical protein. | 0.652 |
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