STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDU89340.1Aerobic C4-dicarboxylate transport protein; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family. (437 aa)    
Predicted Functional Partners:
SDU93079.1
Aerobic C4-dicarboxylate transport protein; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.
  
  
 
0.649
SDU89348.1
Predicted metal-dependent hydrolase, TIM-barrel fold.
       0.610
SDU86126.1
Na+/proline symporter.
  
  
 0.572
SDU86853.1
Succinate dehydrogenase subunit D; Membrane-anchoring subunit of succinate dehydrogenase (SDH).
   
    0.553
SDU89332.1
Outer membrane porin, OprD family.
       0.539
SDV03562.1
Phosphocarrier protein HPr.
     
 0.437
SDV03615.1
Phosphocarrier protein HPr.
     
 0.437
SDU81889.1
Phosphocarrier protein HPr; Belongs to the PEP-utilizing enzyme family.
     
 0.419
SDV06810.1
Glutamate synthase (NADPH) large subunit.
     
 0.419
SDU89356.1
LysR family transcriptional regulator, nitrogen assimilation regulatory protein.
  
    0.415
Your Current Organism:
Pseudomonas mucidolens
NCBI taxonomy Id: 46679
Other names: ATCC 4685, CIP 103298, IAM 12406, JCM 2781, LMG 2223, LMG:2223, NBRC 103159, NCTC 8068, NRRL B-16, P. mucidolens
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