STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDU90214.1Uncharacterized domain 1-containing protein. (139 aa)    
Predicted Functional Partners:
SDU98325.1
Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein.
  
 
 0.695
SDU89527.1
Vanillate O-demethylase ferredoxin subunit.
  
 
  0.556
SDU89673.1
Vanillate O-demethylase ferredoxin subunit.
  
 
  0.556
SDU96977.1
Vanillate O-demethylase ferredoxin subunit.
  
 
  0.556
SDV10792.1
Ferredoxin-NADP reductase.
  
 
  0.556
SDU90207.1
Protein of unknown function.
       0.497
SDU91603.1
NAD(P)H dehydrogenase (quinone).
 
 
  0.476
plsX
Phosphate:acyl-[acyl carrier protein] acyltransferase; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA.
  
  
 0.425
SDV01426.1
Hypothetical protein; Belongs to the UPF0434 family.
  
     0.425
SDU93344.1
NAD(P)H dehydrogenase (quinone).
 
 
  0.421
Your Current Organism:
Pseudomonas mucidolens
NCBI taxonomy Id: 46679
Other names: ATCC 4685, CIP 103298, IAM 12406, JCM 2781, LMG 2223, LMG:2223, NBRC 103159, NCTC 8068, NRRL B-16, P. mucidolens
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