Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDU89527.1 | SDU89673.1 | SAMN05216202_1224 | SAMN05216202_1247 | Vanillate O-demethylase ferredoxin subunit. | Vanillate O-demethylase ferredoxin subunit. | 0.613 |
SDU89527.1 | SDU90214.1 | SAMN05216202_1224 | SAMN05216202_1334 | Vanillate O-demethylase ferredoxin subunit. | Uncharacterized domain 1-containing protein. | 0.556 |
SDU89527.1 | SDU96977.1 | SAMN05216202_1224 | SAMN05216202_2431 | Vanillate O-demethylase ferredoxin subunit. | Vanillate O-demethylase ferredoxin subunit. | 0.563 |
SDU89527.1 | SDU98325.1 | SAMN05216202_1224 | SAMN05216202_2648 | Vanillate O-demethylase ferredoxin subunit. | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | 0.916 |
SDU89527.1 | SDV10792.1 | SAMN05216202_1224 | SAMN05216202_5110 | Vanillate O-demethylase ferredoxin subunit. | Ferredoxin-NADP reductase. | 0.596 |
SDU89673.1 | SDU89527.1 | SAMN05216202_1247 | SAMN05216202_1224 | Vanillate O-demethylase ferredoxin subunit. | Vanillate O-demethylase ferredoxin subunit. | 0.613 |
SDU89673.1 | SDU90214.1 | SAMN05216202_1247 | SAMN05216202_1334 | Vanillate O-demethylase ferredoxin subunit. | Uncharacterized domain 1-containing protein. | 0.556 |
SDU89673.1 | SDU96977.1 | SAMN05216202_1247 | SAMN05216202_2431 | Vanillate O-demethylase ferredoxin subunit. | Vanillate O-demethylase ferredoxin subunit. | 0.612 |
SDU89673.1 | SDU98325.1 | SAMN05216202_1247 | SAMN05216202_2648 | Vanillate O-demethylase ferredoxin subunit. | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | 0.916 |
SDU89673.1 | SDV10792.1 | SAMN05216202_1247 | SAMN05216202_5110 | Vanillate O-demethylase ferredoxin subunit. | Ferredoxin-NADP reductase. | 0.617 |
SDU90207.1 | SDU90214.1 | SAMN05216202_1333 | SAMN05216202_1334 | Protein of unknown function. | Uncharacterized domain 1-containing protein. | 0.497 |
SDU90214.1 | SDU89527.1 | SAMN05216202_1334 | SAMN05216202_1224 | Uncharacterized domain 1-containing protein. | Vanillate O-demethylase ferredoxin subunit. | 0.556 |
SDU90214.1 | SDU89673.1 | SAMN05216202_1334 | SAMN05216202_1247 | Uncharacterized domain 1-containing protein. | Vanillate O-demethylase ferredoxin subunit. | 0.556 |
SDU90214.1 | SDU90207.1 | SAMN05216202_1334 | SAMN05216202_1333 | Uncharacterized domain 1-containing protein. | Protein of unknown function. | 0.497 |
SDU90214.1 | SDU91603.1 | SAMN05216202_1334 | SAMN05216202_1566 | Uncharacterized domain 1-containing protein. | NAD(P)H dehydrogenase (quinone). | 0.476 |
SDU90214.1 | SDU93344.1 | SAMN05216202_1334 | SAMN05216202_1847 | Uncharacterized domain 1-containing protein. | NAD(P)H dehydrogenase (quinone). | 0.421 |
SDU90214.1 | SDU96977.1 | SAMN05216202_1334 | SAMN05216202_2431 | Uncharacterized domain 1-containing protein. | Vanillate O-demethylase ferredoxin subunit. | 0.556 |
SDU90214.1 | SDU98325.1 | SAMN05216202_1334 | SAMN05216202_2648 | Uncharacterized domain 1-containing protein. | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | 0.695 |
SDU90214.1 | SDV01426.1 | SAMN05216202_1334 | SAMN05216202_3163 | Uncharacterized domain 1-containing protein. | Hypothetical protein; Belongs to the UPF0434 family. | 0.425 |
SDU90214.1 | SDV10792.1 | SAMN05216202_1334 | SAMN05216202_5110 | Uncharacterized domain 1-containing protein. | Ferredoxin-NADP reductase. | 0.556 |
page 1 of 3