STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDU94577.1Anaerobic ribonucleoside-triphosphate reductase. (55 aa)    
Predicted Functional Partners:
SDU94583.1
Anaerobic ribonucleoside-triphosphate reductase activating protein.
 
  
 0.961
SDU94570.1
Ribonucleoside-triphosphate reductase class III catalytic subunit.
 
     0.933
queE
7-carboxy-7-deazaguanine synthase; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds.
  
 
 0.866
SDU97896.1
PAS domain S-box-containing protein.
  
 
  0.621
SDU85715.1
Ribonucleoside-diphosphate reductase alpha chain; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.
  
 
 0.605
SDU97187.1
PAS domain S-box-containing protein.
  
 
  0.596
SDV06615.1
Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s).
  
 
  0.589
SDU90347.1
PAS domain S-box-containing protein.
  
 
 0.587
SDU93297.1
GAF sensor hybrid histidine kinase.
    
  0.581
SDU85279.1
Ribonucleoside-diphosphate reductase beta chain; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides; Belongs to the ribonucleoside diphosphate reductase small chain family.
  
 
 0.562
Your Current Organism:
Pseudomonas mucidolens
NCBI taxonomy Id: 46679
Other names: ATCC 4685, CIP 103298, IAM 12406, JCM 2781, LMG 2223, LMG:2223, NBRC 103159, NCTC 8068, NRRL B-16, P. mucidolens
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