STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDV00878.1Pilin (type 1 fimbria component protein). (336 aa)    
Predicted Functional Partners:
SDV00883.1
Outer membrane usher protein.
 
  0.978
SDV00889.1
Chaperone protein EcpD.
 
 
 0.958
SDV01938.1
Chaperone protein EcpD.
 
 
 0.921
SDU94880.1
P pilus assembly protein, chaperone PapD.
 
 
 0.920
SDU99593.1
P pilus assembly protein, chaperone PapD.
 
 
 0.920
SDV01871.1
Chaperone protein EcpD.
 
 
 0.920
SDV00954.1
Fimbrial chaperone protein.
 
 
 0.919
SDV00985.1
P pilus assembly protein, chaperone PapD; Manually curated.
 
 
 0.919
SDV02017.1
Fimbrial chaperone protein.
 
 
 0.919
SDU89688.1
Fimbrial chaperone protein.
  
   0.918
Your Current Organism:
Pseudomonas mucidolens
NCBI taxonomy Id: 46679
Other names: ATCC 4685, CIP 103298, IAM 12406, JCM 2781, LMG 2223, LMG:2223, NBRC 103159, NCTC 8068, NRRL B-16, P. mucidolens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.