STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDV01126.1Amino acid ABC transporter substrate-binding protein, PAAT family. (271 aa)    
Predicted Functional Partners:
SDV01114.1
Protein of unknown function.
   
   0.822
SDV01120.1
Protein of unknown function.
       0.809
SDV06444.1
Uncharacterized membrane protein affecting hemolysin expression.
  
     0.741
SDV11762.1
ABC-type amino acid transport substrate-binding protein.
  
     0.734
SDU86126.1
Na+/proline symporter.
  
 0.666
aroA-2
3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate.
    
 0.640
SDU97896.1
PAS domain S-box-containing protein.
   
 0.638
SDU99199.1
CHAD domain-containing protein.
  
     0.622
SDV01463.1
Multi-sensor hybrid histidine kinase.
   
 0.621
SDV01951.1
Two-component system, NarL family, sensor histidine kinase EvgS.
   
 0.621
Your Current Organism:
Pseudomonas mucidolens
NCBI taxonomy Id: 46679
Other names: ATCC 4685, CIP 103298, IAM 12406, JCM 2781, LMG 2223, LMG:2223, NBRC 103159, NCTC 8068, NRRL B-16, P. mucidolens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.