STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDV05465.1Hypothetical protein. (66 aa)    
Predicted Functional Partners:
SDV05469.1
Hypothetical protein.
       0.773
SDV05473.1
Hypothetical protein.
       0.773
SDV05478.1
Hypothetical protein.
       0.773
SDV05482.1
Hypothetical protein.
       0.773
SDV05487.1
Hypothetical protein.
       0.773
SDV05492.1
Hypothetical protein.
       0.773
SDV05497.1
Hypothetical protein.
       0.773
SDV05502.1
Protein of unknown function.
       0.773
SDV05506.1
Type VI secretion system secreted protein VgrG.
       0.773
SDV05511.1
Type VI secretion system secreted protein Hcp.
       0.545
Your Current Organism:
Pseudomonas mucidolens
NCBI taxonomy Id: 46679
Other names: ATCC 4685, CIP 103298, IAM 12406, JCM 2781, LMG 2223, LMG:2223, NBRC 103159, NCTC 8068, NRRL B-16, P. mucidolens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.