STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDV08146.1Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. (299 aa)    
Predicted Functional Partners:
SDU98980.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.711
SDU89356.1
LysR family transcriptional regulator, nitrogen assimilation regulatory protein.
  
     0.670
SDU95302.1
LysR family transcriptional regulator, nitrogen assimilation regulatory protein.
  
     0.618
SDU88156.1
Transcriptional regulator, LysR family; Manually curated; Belongs to the LysR transcriptional regulatory family.
  
     0.599
SDU97521.1
DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.586
SDV01814.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.551
SDV10126.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.550
SDV07363.1
DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.547
SDV06507.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.545
SDV08142.1
glutaryl-CoA dehydrogenase.
  
  
 0.544
Your Current Organism:
Pseudomonas mucidolens
NCBI taxonomy Id: 46679
Other names: ATCC 4685, CIP 103298, IAM 12406, JCM 2781, LMG 2223, LMG:2223, NBRC 103159, NCTC 8068, NRRL B-16, P. mucidolens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.