STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDV11870.1Transcriptional regulator, LysR family; Manually curated; Belongs to the LysR transcriptional regulatory family. (301 aa)    
Predicted Functional Partners:
SDU95302.1
LysR family transcriptional regulator, nitrogen assimilation regulatory protein.
  
     0.705
SDV11599.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.689
SDU88324.1
DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.628
SDV10480.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.610
SDV10991.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.586
SDU96175.1
Transcriptional regulator, LysR family.
  
     0.584
SDU90280.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.580
SDV10126.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.576
SDU85135.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.575
SDU85864.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
    0.564
Your Current Organism:
Pseudomonas mucidolens
NCBI taxonomy Id: 46679
Other names: ATCC 4685, CIP 103298, IAM 12406, JCM 2781, LMG 2223, LMG:2223, NBRC 103159, NCTC 8068, NRRL B-16, P. mucidolens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.