Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDU82096.1 | SDV12198.1 | SAMN05216202_0093 | SAMN05216202_5443 | Hypothetical protein. | Hypothetical protein. | 0.400 |
SDU84585.1 | SDU85746.1 | SAMN05216202_0477 | SAMN05216202_0664 | Cell division and transport-associated protein TolA. | Two-component system, OmpR family, sensor histidine kinase PhoQ. | 0.461 |
SDU84585.1 | SDV06931.1 | SAMN05216202_0477 | SAMN05216202_4214 | Cell division and transport-associated protein TolA. | Ubiquinone biosynthesis protein UbiJ. | 0.585 |
SDU84585.1 | SDV12198.1 | SAMN05216202_0477 | SAMN05216202_5443 | Cell division and transport-associated protein TolA. | Hypothetical protein. | 0.497 |
SDU85746.1 | SDU84585.1 | SAMN05216202_0664 | SAMN05216202_0477 | Two-component system, OmpR family, sensor histidine kinase PhoQ. | Cell division and transport-associated protein TolA. | 0.461 |
SDU85746.1 | SDV12198.1 | SAMN05216202_0664 | SAMN05216202_5443 | Two-component system, OmpR family, sensor histidine kinase PhoQ. | Hypothetical protein. | 0.459 |
SDV06931.1 | SDU84585.1 | SAMN05216202_4214 | SAMN05216202_0477 | Ubiquinone biosynthesis protein UbiJ. | Cell division and transport-associated protein TolA. | 0.585 |
SDV06931.1 | SDV09676.1 | SAMN05216202_4214 | SAMN05216202_4853 | Ubiquinone biosynthesis protein UbiJ. | HemY protein. | 0.457 |
SDV06931.1 | SDV12198.1 | SAMN05216202_4214 | SAMN05216202_5443 | Ubiquinone biosynthesis protein UbiJ. | Hypothetical protein. | 0.506 |
SDV09676.1 | SDV06931.1 | SAMN05216202_4853 | SAMN05216202_4214 | HemY protein. | Ubiquinone biosynthesis protein UbiJ. | 0.457 |
SDV09676.1 | SDV12198.1 | SAMN05216202_4853 | SAMN05216202_5443 | HemY protein. | Hypothetical protein. | 0.426 |
SDV12180.1 | SDV12190.1 | SAMN05216202_5439 | SAMN05216202_5441 | Magnesium and cobalt transporter. | Phosphate starvation-inducible protein PhoH. | 0.858 |
SDV12180.1 | SDV12198.1 | SAMN05216202_5439 | SAMN05216202_5443 | Magnesium and cobalt transporter. | Hypothetical protein. | 0.462 |
SDV12180.1 | lnt | SAMN05216202_5439 | SAMN05216202_5438 | Magnesium and cobalt transporter. | Apolipoprotein N-acyltransferase; Catalyzes the phospholipid dependent N-acylation of the N- terminal cysteine of apolipoprotein, the last step in lipoprotein maturation; Belongs to the CN hydrolase family. Apolipoprotein N- acyltransferase subfamily. | 0.903 |
SDV12180.1 | miaB | SAMN05216202_5439 | SAMN05216202_5442 | Magnesium and cobalt transporter. | tRNA-i(6)A37 thiotransferase enzyme MiaB; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine. | 0.579 |
SDV12180.1 | ybeY | SAMN05216202_5439 | SAMN05216202_5440 | Magnesium and cobalt transporter. | Probable rRNA maturation factor; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.945 |
SDV12190.1 | SDV12180.1 | SAMN05216202_5441 | SAMN05216202_5439 | Phosphate starvation-inducible protein PhoH. | Magnesium and cobalt transporter. | 0.858 |
SDV12190.1 | SDV12198.1 | SAMN05216202_5441 | SAMN05216202_5443 | Phosphate starvation-inducible protein PhoH. | Hypothetical protein. | 0.491 |
SDV12190.1 | lnt | SAMN05216202_5441 | SAMN05216202_5438 | Phosphate starvation-inducible protein PhoH. | Apolipoprotein N-acyltransferase; Catalyzes the phospholipid dependent N-acylation of the N- terminal cysteine of apolipoprotein, the last step in lipoprotein maturation; Belongs to the CN hydrolase family. Apolipoprotein N- acyltransferase subfamily. | 0.840 |
SDV12190.1 | miaB | SAMN05216202_5441 | SAMN05216202_5442 | Phosphate starvation-inducible protein PhoH. | tRNA-i(6)A37 thiotransferase enzyme MiaB; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine. | 0.629 |
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