Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CEG18_08865 | CEG18_08870 | GCA_000807755_00453 | GCA_000807755_00452 | Unannotated protein. | Unannotated protein. | 0.932 |
CEG18_08865 | CEG18_08880 | GCA_000807755_00453 | GCA_000807755_00450 | Unannotated protein. | Unannotated protein; Belongs to the amidase family. | 0.860 |
CEG18_08865 | CEG18_08885 | GCA_000807755_00453 | GCA_000807755_00449 | Unannotated protein. | Unannotated protein. | 0.933 |
CEG18_08865 | CEG18_08890 | GCA_000807755_00453 | GCA_000807755_00448 | Unannotated protein. | Unannotated protein. | 0.912 |
CEG18_08870 | CEG18_08865 | GCA_000807755_00452 | GCA_000807755_00453 | Unannotated protein. | Unannotated protein. | 0.932 |
CEG18_08870 | CEG18_08880 | GCA_000807755_00452 | GCA_000807755_00450 | Unannotated protein. | Unannotated protein; Belongs to the amidase family. | 0.851 |
CEG18_08870 | CEG18_08885 | GCA_000807755_00452 | GCA_000807755_00449 | Unannotated protein. | Unannotated protein. | 0.950 |
CEG18_08870 | CEG18_08890 | GCA_000807755_00452 | GCA_000807755_00448 | Unannotated protein. | Unannotated protein. | 0.950 |
CEG18_08880 | CEG18_08865 | GCA_000807755_00450 | GCA_000807755_00453 | Unannotated protein; Belongs to the amidase family. | Unannotated protein. | 0.860 |
CEG18_08880 | CEG18_08870 | GCA_000807755_00450 | GCA_000807755_00452 | Unannotated protein; Belongs to the amidase family. | Unannotated protein. | 0.851 |
CEG18_08880 | CEG18_08885 | GCA_000807755_00450 | GCA_000807755_00449 | Unannotated protein; Belongs to the amidase family. | Unannotated protein. | 0.860 |
CEG18_08880 | CEG18_08890 | GCA_000807755_00450 | GCA_000807755_00448 | Unannotated protein; Belongs to the amidase family. | Unannotated protein. | 0.851 |
CEG18_08880 | aspS | GCA_000807755_00450 | GCA_000807755_04162 | Unannotated protein; Belongs to the amidase family. | Unannotated protein; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily. | 0.843 |
CEG18_08880 | gatB | GCA_000807755_00450 | GCA_000807755_02620 | Unannotated protein; Belongs to the amidase family. | Unannotated protein; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily. | 0.998 |
CEG18_08880 | gatC | GCA_000807755_00450 | GCA_000807755_02622 | Unannotated protein; Belongs to the amidase family. | Unannotated protein; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family. | 0.995 |
CEG18_08880 | glnS | GCA_000807755_00450 | GCA_000807755_02162 | Unannotated protein; Belongs to the amidase family. | Unannotated protein. | 0.939 |
CEG18_08880 | gltX | GCA_000807755_00450 | GCA_000807755_01550 | Unannotated protein; Belongs to the amidase family. | Unannotated protein; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu). | 0.906 |
CEG18_08880 | gluQ | GCA_000807755_00450 | GCA_000807755_05091 | Unannotated protein; Belongs to the amidase family. | Unannotated protein; Catalyzes the tRNA-independent activation of glutamate in presence of ATP and the subsequent transfer of glutamate onto a tRNA(Asp). Glutamate is transferred on the 2-amino-5-(4,5-dihydroxy-2- cyclopenten-1-yl) moiety of the queuosine in the wobble position of the QUC anticodon; Belongs to the class-I aminoacyl-tRNA synthetase family. GluQ subfamily. | 0.871 |
CEG18_08885 | CEG18_08865 | GCA_000807755_00449 | GCA_000807755_00453 | Unannotated protein. | Unannotated protein. | 0.933 |
CEG18_08885 | CEG18_08870 | GCA_000807755_00449 | GCA_000807755_00452 | Unannotated protein. | Unannotated protein. | 0.950 |
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