Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CEG18_06515 | GCA_000807755_00521 | GCA_000807755_01553 | GCA_000807755_00521 | Unannotated protein. | Unannotated protein. | 0.669 |
CEG18_10395 | CEG18_19050 | GCA_000807755_00094 | GCA_000807755_04040 | Unannotated protein; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | Unannotated protein. | 0.961 |
CEG18_10395 | GCA_000807755_00521 | GCA_000807755_00094 | GCA_000807755_00521 | Unannotated protein; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | Unannotated protein. | 0.605 |
CEG18_10395 | pheA | GCA_000807755_00094 | GCA_000807755_04367 | Unannotated protein; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | Unannotated protein. | 0.626 |
CEG18_15380 | GCA_000807755_00521 | GCA_000807755_00614 | GCA_000807755_00521 | Unannotated protein. | Unannotated protein. | 0.687 |
CEG18_16985 | CEG18_16990 | GCA_000807755_00519 | GCA_000807755_00518 | Unannotated protein. | Unannotated protein; Involved in arsenical resistance. Thought to form the channel of an arsenite pump; Belongs to the ArsB family. | 0.895 |
CEG18_16985 | GCA_000807755_00520 | GCA_000807755_00519 | GCA_000807755_00520 | Unannotated protein. | Unannotated protein. | 0.520 |
CEG18_16985 | GCA_000807755_00521 | GCA_000807755_00519 | GCA_000807755_00521 | Unannotated protein. | Unannotated protein. | 0.410 |
CEG18_16990 | CEG18_16985 | GCA_000807755_00518 | GCA_000807755_00519 | Unannotated protein; Involved in arsenical resistance. Thought to form the channel of an arsenite pump; Belongs to the ArsB family. | Unannotated protein. | 0.895 |
CEG18_16990 | GCA_000807755_00520 | GCA_000807755_00518 | GCA_000807755_00520 | Unannotated protein; Involved in arsenical resistance. Thought to form the channel of an arsenite pump; Belongs to the ArsB family. | Unannotated protein. | 0.493 |
CEG18_16990 | GCA_000807755_00521 | GCA_000807755_00518 | GCA_000807755_00521 | Unannotated protein; Involved in arsenical resistance. Thought to form the channel of an arsenite pump; Belongs to the ArsB family. | Unannotated protein. | 0.411 |
CEG18_19050 | CEG18_10395 | GCA_000807755_04040 | GCA_000807755_00094 | Unannotated protein. | Unannotated protein; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.961 |
CEG18_19050 | GCA_000807755_00521 | GCA_000807755_04040 | GCA_000807755_00521 | Unannotated protein. | Unannotated protein. | 0.658 |
CEG18_19050 | pheA | GCA_000807755_04040 | GCA_000807755_04367 | Unannotated protein. | Unannotated protein. | 0.910 |
CEG18_20550 | GCA_000807755_00521 | GCA_000807755_06791 | GCA_000807755_00521 | Unannotated protein. | Unannotated protein. | 0.644 |
CEG18_23130 | GCA_000807755_00521 | GCA_000807755_06559 | GCA_000807755_00521 | Unannotated protein. | Unannotated protein. | 0.678 |
GCA_000807755_00520 | CEG18_16985 | GCA_000807755_00520 | GCA_000807755_00519 | Unannotated protein. | Unannotated protein. | 0.520 |
GCA_000807755_00520 | CEG18_16990 | GCA_000807755_00520 | GCA_000807755_00518 | Unannotated protein. | Unannotated protein; Involved in arsenical resistance. Thought to form the channel of an arsenite pump; Belongs to the ArsB family. | 0.493 |
GCA_000807755_00520 | GCA_000807755_00521 | GCA_000807755_00520 | GCA_000807755_00521 | Unannotated protein. | Unannotated protein. | 0.603 |
GCA_000807755_00521 | CEG18_06515 | GCA_000807755_00521 | GCA_000807755_01553 | Unannotated protein. | Unannotated protein. | 0.669 |
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