Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CEG18_08935 | CEG18_26595 | GCA_000807755_01933 | GCA_000807755_00748 | Unannotated protein. | Unannotated protein. | 0.635 |
CEG18_08935 | pqqB | GCA_000807755_01933 | GCA_000807755_00744 | Unannotated protein. | Unannotated protein; May be involved in the transport of PQQ or its precursor to the periplasm; Belongs to the PqqB family. | 0.486 |
CEG18_08935 | pqqC | GCA_000807755_01933 | GCA_000807755_00745 | Unannotated protein. | Unannotated protein; Ring cyclization and eight-electron oxidation of 3a-(2-amino- 2-carboxyethyl)-4,5-dioxo-4,5,6,7,8,9-hexahydroquinoline-7,9- dicarboxylic-acid to PQQ. | 0.537 |
CEG18_08935 | pqqD | GCA_000807755_01933 | GCA_000807755_00746 | Unannotated protein. | Unannotated protein; Functions as a PqqA binding protein and presents PqqA to PqqE, in the pyrroloquinoline quinone (PQQ) biosynthetic pathway. | 0.506 |
CEG18_08935 | pqqE | GCA_000807755_01933 | GCA_000807755_00747 | Unannotated protein. | Unannotated protein; Catalyzes the cross-linking of a glutamate residue and a tyrosine residue in the PqqA protein as part of the biosynthesis of pyrroloquinoline quinone (PQQ). | 0.705 |
CEG18_13780 | CEG18_26595 | GCA_000807755_05384 | GCA_000807755_00748 | Unannotated protein; Belongs to the CinA family. | Unannotated protein. | 0.645 |
CEG18_13780 | nadD | GCA_000807755_05384 | GCA_000807755_01199 | Unannotated protein; Belongs to the CinA family. | Unannotated protein; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | 0.891 |
CEG18_26595 | CEG18_08935 | GCA_000807755_00748 | GCA_000807755_01933 | Unannotated protein. | Unannotated protein. | 0.635 |
CEG18_26595 | CEG18_13780 | GCA_000807755_00748 | GCA_000807755_05384 | Unannotated protein. | Unannotated protein; Belongs to the CinA family. | 0.645 |
CEG18_26595 | guaA | GCA_000807755_00748 | GCA_000807755_04013 | Unannotated protein. | Unannotated protein; Catalyzes the synthesis of GMP from XMP. | 0.742 |
CEG18_26595 | guaB | GCA_000807755_00748 | GCA_000807755_04012 | Unannotated protein. | Unannotated protein; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.759 |
CEG18_26595 | nadD | GCA_000807755_00748 | GCA_000807755_01199 | Unannotated protein. | Unannotated protein; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | 0.661 |
CEG18_26595 | pqqB | GCA_000807755_00748 | GCA_000807755_00744 | Unannotated protein. | Unannotated protein; May be involved in the transport of PQQ or its precursor to the periplasm; Belongs to the PqqB family. | 0.926 |
CEG18_26595 | pqqC | GCA_000807755_00748 | GCA_000807755_00745 | Unannotated protein. | Unannotated protein; Ring cyclization and eight-electron oxidation of 3a-(2-amino- 2-carboxyethyl)-4,5-dioxo-4,5,6,7,8,9-hexahydroquinoline-7,9- dicarboxylic-acid to PQQ. | 0.928 |
CEG18_26595 | pqqD | GCA_000807755_00748 | GCA_000807755_00746 | Unannotated protein. | Unannotated protein; Functions as a PqqA binding protein and presents PqqA to PqqE, in the pyrroloquinoline quinone (PQQ) biosynthetic pathway. | 0.892 |
CEG18_26595 | pqqE | GCA_000807755_00748 | GCA_000807755_00747 | Unannotated protein. | Unannotated protein; Catalyzes the cross-linking of a glutamate residue and a tyrosine residue in the PqqA protein as part of the biosynthesis of pyrroloquinoline quinone (PQQ). | 0.947 |
CEG18_26595 | pyrF | GCA_000807755_00748 | GCA_000807755_03335 | Unannotated protein. | Unannotated protein; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily. | 0.624 |
guaA | CEG18_26595 | GCA_000807755_04013 | GCA_000807755_00748 | Unannotated protein; Catalyzes the synthesis of GMP from XMP. | Unannotated protein. | 0.742 |
guaA | guaB | GCA_000807755_04013 | GCA_000807755_04012 | Unannotated protein; Catalyzes the synthesis of GMP from XMP. | Unannotated protein; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.999 |
guaA | nadD | GCA_000807755_04013 | GCA_000807755_01199 | Unannotated protein; Catalyzes the synthesis of GMP from XMP. | Unannotated protein; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | 0.464 |
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