Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CEG18_00905 | CEG18_00910 | GCA_000807755_06164 | GCA_000807755_06166 | Unannotated protein. | Unannotated protein. | 0.746 |
CEG18_00905 | GCA_000807755_02945 | GCA_000807755_06164 | GCA_000807755_02945 | Unannotated protein. | Unannotated protein. | 0.425 |
CEG18_00905 | ubiA | GCA_000807755_06164 | GCA_000807755_07016 | Unannotated protein. | Unannotated protein; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3-octaprenyl-4-hydroxybenzoate. | 0.775 |
CEG18_00905 | ubiD | GCA_000807755_06164 | GCA_000807755_06141 | Unannotated protein. | Unannotated protein; Catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol, an intermediate step in ubiquinone biosynthesis. | 0.633 |
CEG18_00905 | ubiX | GCA_000807755_06164 | GCA_000807755_01324 | Unannotated protein. | Unannotated protein; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family. | 0.581 |
CEG18_00910 | CEG18_00905 | GCA_000807755_06166 | GCA_000807755_06164 | Unannotated protein. | Unannotated protein. | 0.746 |
CEG18_00910 | CEG18_09210 | GCA_000807755_06166 | GCA_000807755_00336 | Unannotated protein. | Unannotated protein. | 0.743 |
CEG18_00910 | GCA_000807755_02945 | GCA_000807755_06166 | GCA_000807755_02945 | Unannotated protein. | Unannotated protein. | 0.425 |
CEG18_00910 | ubiA | GCA_000807755_06166 | GCA_000807755_07016 | Unannotated protein. | Unannotated protein; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3-octaprenyl-4-hydroxybenzoate. | 0.788 |
CEG18_00910 | ubiD | GCA_000807755_06166 | GCA_000807755_06141 | Unannotated protein. | Unannotated protein; Catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol, an intermediate step in ubiquinone biosynthesis. | 0.852 |
CEG18_00910 | ubiX | GCA_000807755_06166 | GCA_000807755_01324 | Unannotated protein. | Unannotated protein; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family. | 0.714 |
CEG18_09210 | CEG18_00910 | GCA_000807755_00336 | GCA_000807755_06166 | Unannotated protein. | Unannotated protein. | 0.743 |
CEG18_09210 | GCA_000807755_02945 | GCA_000807755_00336 | GCA_000807755_02945 | Unannotated protein. | Unannotated protein. | 0.425 |
CEG18_09210 | ubiA | GCA_000807755_00336 | GCA_000807755_07016 | Unannotated protein. | Unannotated protein; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3-octaprenyl-4-hydroxybenzoate. | 0.612 |
CEG18_09210 | ubiD | GCA_000807755_00336 | GCA_000807755_06141 | Unannotated protein. | Unannotated protein; Catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol, an intermediate step in ubiquinone biosynthesis. | 0.716 |
CEG18_09210 | ubiX | GCA_000807755_00336 | GCA_000807755_01324 | Unannotated protein. | Unannotated protein; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family. | 0.714 |
CEG18_25740 | mpl | GCA_000807755_01325 | GCA_000807755_01323 | Unannotated protein. | Unannotated protein; Reutilizes the intact tripeptide L-alanyl-gamma-D-glutamyl- meso-diaminopimelate by linking it to UDP-N-acetylmuramate. Belongs to the MurCDEF family. Mpl subfamily. | 0.805 |
CEG18_25740 | ubiX | GCA_000807755_01325 | GCA_000807755_01324 | Unannotated protein. | Unannotated protein; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family. | 0.805 |
GCA_000807755_02860 | GCA_000807755_02945 | GCA_000807755_02860 | GCA_000807755_02945 | Unannotated protein. | Unannotated protein. | 0.518 |
GCA_000807755_02860 | ubiD | GCA_000807755_02860 | GCA_000807755_06141 | Unannotated protein. | Unannotated protein; Catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol, an intermediate step in ubiquinone biosynthesis. | 0.554 |
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