STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEG18_23875Unannotated protein. (121 aa)    
Predicted Functional Partners:
CEG18_23885
Unannotated protein.
 
  
 0.943
CEG18_23880
Unannotated protein.
 
    0.907
ccoP
Unannotated protein; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
 
 
 0.868
ccoP-2
Unannotated protein; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
 
 
 0.867
coxB
Unannotated protein; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
 
 
 0.861
CEG18_00145
Unannotated protein.
 
  
 0.824
CEG18_20825
Unannotated protein.
    
   0.767
CEG18_21565
Unannotated protein.
 
  
  0.735
GCA_000807755_03557
Unannotated protein.
    
   0.724
GCA_000807755_03558
Unannotated protein.
    
   0.724
Your Current Organism:
Pseudomonas nitroreducens
NCBI taxonomy Id: 46680
Other names: ATCC 33634, CCUG 12538, CIP 106747, DSM 14399, IFO 12694, JCM 2782, NBRC 12694, P. nitroreducens, Pseudomonas azelaica, strain P-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.