Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CEG18_04545 | CEG18_05640 | GCA_000807755_04142 | GCA_000807755_05453 | Unannotated protein. | Unannotated protein. | 0.935 |
CEG18_04545 | CEG18_21575 | GCA_000807755_04142 | GCA_000807755_06008 | Unannotated protein. | Unannotated protein. | 0.967 |
CEG18_04545 | GCA_000807755_02509 | GCA_000807755_04142 | GCA_000807755_02509 | Unannotated protein. | Unannotated protein. | 0.899 |
CEG18_04545 | GCA_000807755_03640 | GCA_000807755_04142 | GCA_000807755_03640 | Unannotated protein. | Unannotated protein. | 0.910 |
CEG18_04545 | GCA_000807755_06496 | GCA_000807755_04142 | GCA_000807755_06496 | Unannotated protein. | Unannotated protein. | 0.910 |
CEG18_04545 | ahpC | GCA_000807755_04142 | GCA_000807755_06068 | Unannotated protein. | Unannotated protein; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily. | 0.935 |
CEG18_04545 | coxB | GCA_000807755_04142 | GCA_000807755_06017 | Unannotated protein. | Unannotated protein; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | 0.908 |
CEG18_04545 | dsbD | GCA_000807755_04142 | GCA_000807755_04893 | Unannotated protein. | Unannotated protein; Required to facilitate the formation of correct disulfide bonds in some periplasmic proteins and for the assembly of the periplasmic c-type cytochromes. Acts by transferring electrons from cytoplasmic thioredoxin to the periplasm. This transfer involves a cascade of disulfide bond formation and reduction steps. Belongs to the thioredoxin family. DsbD subfamily. | 0.965 |
CEG18_04545 | lpdA | GCA_000807755_04142 | GCA_000807755_00104 | Unannotated protein. | Unannotated protein. | 0.872 |
CEG18_04545 | msrA | GCA_000807755_04142 | GCA_000807755_04732 | Unannotated protein. | Unannotated protein; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.963 |
CEG18_05640 | CEG18_04545 | GCA_000807755_05453 | GCA_000807755_04142 | Unannotated protein. | Unannotated protein. | 0.935 |
CEG18_05640 | GCA_000807755_02509 | GCA_000807755_05453 | GCA_000807755_02509 | Unannotated protein. | Unannotated protein. | 0.578 |
CEG18_05640 | GCA_000807755_03640 | GCA_000807755_05453 | GCA_000807755_03640 | Unannotated protein. | Unannotated protein. | 0.586 |
CEG18_05640 | GCA_000807755_06496 | GCA_000807755_05453 | GCA_000807755_06496 | Unannotated protein. | Unannotated protein. | 0.586 |
CEG18_05640 | lpdA | GCA_000807755_05453 | GCA_000807755_00104 | Unannotated protein. | Unannotated protein. | 0.462 |
CEG18_21575 | CEG18_04545 | GCA_000807755_06008 | GCA_000807755_04142 | Unannotated protein. | Unannotated protein. | 0.967 |
CEG18_21575 | coxB | GCA_000807755_06008 | GCA_000807755_06017 | Unannotated protein. | Unannotated protein; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | 0.972 |
GCA_000807755_02509 | CEG18_04545 | GCA_000807755_02509 | GCA_000807755_04142 | Unannotated protein. | Unannotated protein. | 0.899 |
GCA_000807755_02509 | CEG18_05640 | GCA_000807755_02509 | GCA_000807755_05453 | Unannotated protein. | Unannotated protein. | 0.578 |
GCA_000807755_02509 | GCA_000807755_03640 | GCA_000807755_02509 | GCA_000807755_03640 | Unannotated protein. | Unannotated protein. | 0.461 |
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