Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EFL37203.1 | EFL41304.1 | SSRG_00007 | SSRG_04108 | Single-strand binding protein. | Single-stranded DNA-binding protein 2. | 0.900 |
| EFL37203.1 | EFL41458.1 | SSRG_00007 | SSRG_04262 | Single-strand binding protein. | DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination. | 0.814 |
| EFL37203.1 | EFL41606.1 | SSRG_00007 | SSRG_04410 | Single-strand binding protein. | Phosphoglycerate mutase. | 0.853 |
| EFL37203.1 | EFL41859.1 | SSRG_00007 | SSRG_04663 | Single-strand binding protein. | DNA polymerase III, alpha subunit. | 0.922 |
| EFL37203.1 | EFL42172.1 | SSRG_00007 | SSRG_04976 | Single-strand binding protein. | DNA polymerase III, alpha subunit; Belongs to the DNA polymerase type-C family. DnaE2 subfamily. | 0.903 |
| EFL37203.1 | EFL42459.1 | SSRG_00007 | SSRG_05263 | Single-strand binding protein. | Primosomal protein N. | 0.904 |
| EFL37203.1 | dnaX | SSRG_00007 | SSRG_03339 | Single-strand binding protein. | DNA polymerase III, subunit gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | 0.945 |
| EFL37203.1 | rnhA | SSRG_00007 | SSRG_00478 | Single-strand binding protein. | Ribonuclease HI (RNase HI); Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | 0.796 |
| EFL37203.1 | rplJ | SSRG_00007 | SSRG_02531 | Single-strand binding protein. | Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | 0.775 |
| EFL37203.1 | topA | SSRG_00007 | SSRG_02845 | Single-strand binding protein. | DNA topoisomerase; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA superc [...] | 0.797 |
| EFL41304.1 | EFL37203.1 | SSRG_04108 | SSRG_00007 | Single-stranded DNA-binding protein 2. | Single-strand binding protein. | 0.900 |
| EFL41304.1 | EFL41458.1 | SSRG_04108 | SSRG_04262 | Single-stranded DNA-binding protein 2. | DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination. | 0.722 |
| EFL41304.1 | EFL41606.1 | SSRG_04108 | SSRG_04410 | Single-stranded DNA-binding protein 2. | Phosphoglycerate mutase. | 0.853 |
| EFL41304.1 | EFL41859.1 | SSRG_04108 | SSRG_04663 | Single-stranded DNA-binding protein 2. | DNA polymerase III, alpha subunit. | 0.919 |
| EFL41304.1 | EFL42172.1 | SSRG_04108 | SSRG_04976 | Single-stranded DNA-binding protein 2. | DNA polymerase III, alpha subunit; Belongs to the DNA polymerase type-C family. DnaE2 subfamily. | 0.903 |
| EFL41304.1 | EFL42459.1 | SSRG_04108 | SSRG_05263 | Single-stranded DNA-binding protein 2. | Primosomal protein N. | 0.914 |
| EFL41304.1 | dnaX | SSRG_04108 | SSRG_03339 | Single-stranded DNA-binding protein 2. | DNA polymerase III, subunit gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | 0.943 |
| EFL41304.1 | rnhA | SSRG_04108 | SSRG_00478 | Single-stranded DNA-binding protein 2. | Ribonuclease HI (RNase HI); Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | 0.796 |
| EFL41304.1 | rplJ | SSRG_04108 | SSRG_02531 | Single-stranded DNA-binding protein 2. | Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | 0.758 |
| EFL41304.1 | topA | SSRG_04108 | SSRG_02845 | Single-stranded DNA-binding protein 2. | DNA topoisomerase; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA superc [...] | 0.802 |
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